Package com.im.df.api.support

Interface DFNewTypeWellKnownOptions.NewJChemBaseEntity

    • Field Detail

      • PROP_ABSOLUTE_STEREO

        static final java.lang.String PROP_ABSOLUTE_STEREO
        See Also:
        Constant Field Values

      • PROP_DUPLICATE_FILTERING

        static final java.lang.String PROP_DUPLICATE_FILTERING
        See Also:
        Constant Field Values

      • PROP_TAUTOMER_DUPLICATE_CHECKING

        static final java.lang.String PROP_TAUTOMER_DUPLICATE_CHECKING
        See Also:
        Constant Field Values

      • PROP_EMPTY_STRUCTURES_ALLOWED

        static final java.lang.String PROP_EMPTY_STRUCTURES_ALLOWED
        See Also:
        Constant Field Values

      • PROP_STANDARDIZER_CONFIG

        static final java.lang.String PROP_STANDARDIZER_CONFIG
        See Also:
        Constant Field Values

      • PROP_JCHEM_TABLE_TYPE

        static final java.lang.String PROP_JCHEM_TABLE_TYPE
        See Also:
        Constant Field Values

      • PROP_VALID_JCHEM_TABLE_TYPES

        static final java.lang.String PROP_VALID_JCHEM_TABLE_TYPES
        See Also:
        Constant Field Values

      • PROP_NUMBER_OF_EDGES

        static final java.lang.String PROP_NUMBER_OF_EDGES
        See Also:
        Constant Field Values

    • Method Detail

      • getNumberOfInts

        int getNumberOfInts()

      • setNumberOfInts

        void setNumberOfInts​(int numberOfInts)
              throws java.lang.IllegalArgumentException
        Parameters:
        numberOfInts - the fingerprint length
        Throws:
        java.lang.IllegalArgumentException - when the value is not valid for current JChem table type

      • getNumberOfOnes

        int getNumberOfOnes()

      • setNumberOfOnes

        void setNumberOfOnes​(int numberOfOnes)
              throws java.lang.IllegalArgumentException
        Parameters:
        numberOfOnes - the number of bits set per pattern
        Throws:
        java.lang.IllegalArgumentException - when the value is not valid for current JChem table type

      • getNumberOfEdges

        int getNumberOfEdges()

      • setNumberOfEdges

        void setNumberOfEdges​(int numberOfEdges)
               throws java.lang.IllegalArgumentException
        Parameters:
        numberOfEdges - the maximal length of a fingerprint pattern
        Throws:
        java.lang.IllegalArgumentException - when the value is not valid for current JChem table type

      • getJchemTableType

        int getJchemTableType()

      • setJchemTableType

        void setJchemTableType​(int tableType)

      • setValidJchemTableTypes

        void setValidJchemTableTypes​(int[] types)
        Set the possible JChem table types to these types.
        Parameters:
        types - The table types as defined by the UpdataHandler.TABLE_TYPE_* values

      • getValidJchemTableTypes

        int[] getValidJchemTableTypes()
        Get the valid JChem table types.
        Returns:
        The valid table types as defined by the UpdataHandler.TABLE_TYPE_* values

      • isAbsoluteStereo

        boolean isAbsoluteStereo()

      • setAbsoluteStereo

        void setAbsoluteStereo​(boolean absoluteStereo)

      • isDuplicateFiltering

        boolean isDuplicateFiltering()

      • setDuplicateFiltering

        void setDuplicateFiltering​(boolean duplicateFiltering)

      • isTautomerDuplicateChecking

        boolean isTautomerDuplicateChecking()

      • setTautomerDuplicateChecking

        void setTautomerDuplicateChecking​(boolean duplicateFiltering)

      • isEmptyStructuresAllowed

        boolean isEmptyStructuresAllowed()

      • setEmptyStructuresAllowed

        void setEmptyStructuresAllowed​(boolean emptyStructuresAllowed)

      • getJChemPropertyTable

        com.im.commons.db.util.SchemaQualifiedName getJChemPropertyTable()

      • setJChemPropertyTable

        void setJChemPropertyTable​(com.im.commons.db.util.SchemaQualifiedName propertyTableName)

      • getStandardizerConfig

        java.lang.String getStandardizerConfig()

      • setStandardizerConfig

        void setStandardizerConfig​(java.lang.String standardizerConfig)