Overlapping Atoms

  • Checker searches for overlapping atoms, i.e., atoms closer than the pre-set percentage of the default atom radius.

  • Fixer offers cleaning the structures by 2D clean (clean).

Example:

Overlapping Atoms Checker (overlappingAtoms)

Warning:

Fix

Clean (clean)

Detect Overlapping Atoms

images/download/attachments/44601951/ex_overlappingatoms_ch.png
ex_overlappingatoms_ch

images/download/attachments/44601951/ex_overlappingatoms_f.png
ex_overlappingatoms_f