Bond Pop-up Menu
The bond pop-up menu appears when you right-click on a bond within the molecule. It allows you to make a number of changes to the selected bond. It contains options for bond-specific activities that also can be accessed from the Bond Menu.
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Menu Item |
Submenu Items |
Description |
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Type |
Single |
Changes the selected bond type to Single. |
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Double |
Changes the selected bond type to Double. |
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Triple |
Changes the selected bond type to Triple. |
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Aromatic |
Changes the selected bond type to Aromatic. |
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Wedge bond types |
Changes the selected bond to a Wedge bond type to represent a stereo bond: Single Up or Single Down. |
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Query bond types |
Changes the selected bond to a bond type to be used in a query: |
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Coordinate |
Changes the selected bond type to Coordinate. |
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Bold |
Thickens the selected bond. |
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Hashed |
Changes the selected bond hashed. |
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Topology |
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The following options can be set as bond property when the molecule is used as a query. |
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None |
Removes defined bond topologies. |
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In Ring |
The specified bond must be in a ring to score a hit. |
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In Chain |
The specified bond must be in a chain to score a hit. |
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Reacting Center |
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The following bond property options can be set in case of drawing reaction search queries. See Reacting center bond for further query feature descriptions. |
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None |
Removes added bond property. |
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Center |
Specifies that the bond takes part in the reaction. |
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Make or Break |
The assigned bond can form or disappear in the reaction. |
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Change |
The assigned bond remains and can alter during the reaction. |
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Make and Change |
The assigned bond can form, break,or change its type during the reaction. |
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Not Center |
The assigned bond can not be the reaction center. |
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Stereo Search |
Uses stereoconfiguration of specified double bond when the molecule is used as a query. |
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Arrange |
Bring to Front |
Brings the selected bond in front of the others. |
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Send to Back |
Sends the selected bond to the back of the others. |
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Align
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Horizontally |
Orients the selected bond horizontally. |
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Vertically |
Orients the bond vertically. |
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Cut |
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Copy |
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Copy As |
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Delete |
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Group |
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Add/Remove |
Explicit Hydrogens |
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Map Atoms |
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Data |
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Multi-Center |
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Position Variation Bond |
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