Methods Deprecated or Removed in version 6.2
Deprecated elements in the API |
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Name of deprecated class, field or method |
Deprecation version |
Recommended class, field or method |
chemaxon.core.calculations.valencecheck |
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ValenceCheckOptions.ValenceCheckOptions(boolean localAromatic, boolean traditionalNallowed) |
Marvin 6.2 |
chemaxon.core.calculations.valencecheck.ValenceCheckOptions.Builder |
chemaxon.struc |
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MolAtom.getRadical() |
Marvin 6.2 |
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MolAtom.setRadical(int r) |
Marvin 6.2 |
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MolBond.isRemovable() |
Marvin 6.2 |
Not supported feature. |
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Molecule.RM_KEEP_LEAVINGGROUPS |
Marvin 6.2 |
Not supported feature. |
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Molecule.isGUIContracted() |
Marvin 6.2 |
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Molecule.mergeAtoms(MolAtom that, MolAtom node) |
Marvin 6.2 |
chemaxon.struc.util.moleculeutil.MergeUtil.mergeAtoms(MolAtom, MolAtom, boolean) |
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Molecule.setGUIContracted(boolean contract, int opts) |
Marvin 6.2 |
chemaxon.struc.Molecule.expandSgroups(int) |
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Molecule.setGUIContracted(boolean contract) |
Marvin 6.2 |
chemaxon.struc.Molecule.expandSgroups(int) |
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MoleculeGraph.createBHtab() |
Marvin 6.2 |
No replacement. |
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MoleculeGraph.insertAtom(int i, MolAtom atom) |
Marvin 6.2 |
chemaxon.struc.MoleculeGraph |
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MoleculeGraph.insertBond(int i, MolBond bond) |
Marvin 6.2 |
chemaxon.struc.MoleculeGraph |
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MoleculeGraph.mergeAtoms(MolAtom replacementAtom, MolAtom origAtom) |
Marvin 6.2 |
chemaxon.struc.util.moleculeutil.MergeUtil.mergeAtoms(MolAtom, MolAtom, boolean) |
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MoleculeGraph.replaceBond(MolBond oldb, MolBond newb) |
Marvin 6.2 |
chemaxon.struc.MoleculeGraph |
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MoleculeGraph.setAtom(int i, MolAtom atom) |
Marvin 6.2 |
chemaxon.struc.MoleculeGraph |
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MoleculeGraph.setBond(int i, MolBond b) |
Marvin 6.2 |
chemaxon.struc.MoleculeGraph |
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RgMolecule.mergeAtoms(MolAtom that, MolAtom a) |
Marvin 6.2 |
chemaxon.struc.util.moleculeutil.MergeUtil.mergeAtoms(MolAtom, MolAtom, boolean) |
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RgMolecule.replaceBond(MolBond olde, MolBond newe) |
Marvin 6.2 |
chemaxon.struc.MoleculeGraph |
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RgMolecule.setAtom(int iu, MolAtom node) |
Marvin 6.2 |
chemaxon.struc.MoleculeGraph |
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RgMolecule.setBond(int iu, MolBond edge) |
Marvin 6.2 |
chemaxon.struc.MoleculeGraph |
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RxnMolecule.mergeAtoms(MolAtom that, MolAtom node) |
Marvin 6.2 |
chemaxon.struc.util.moleculeutil.MergeUtil.mergeAtoms(MolAtom, MolAtom, boolean) |
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RxnMolecule.replaceBond(MolBond olde, MolBond newe) |
Marvin 6.2 |
chemaxon.struc.MoleculeGraph |
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RxnMolecule.setAtom(int iu, MolAtom node) |
Marvin 6.2 |
chemaxon.struc.MoleculeGraph |
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RxnMolecule.setBond(int iu, MolBond edge) |
Marvin 6.2 |
chemaxon.struc.MoleculeGraph |
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SelectionMolecule.setBond(int i, MolBond bond) |
Marvin 6.2 |
chemaxon.struc.SelectionMolecule.removeBond(MolBond) |
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Sgroup.setGUIStateRecursively(boolean contract, int opts) |
Marvin 6.2 |
chemaxon.struc.Molecule.setGUIContracted(boolean) |
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Sgroup.setGUIStateRecursively(boolean v) |
Marvin 6.2 |
chemaxon.struc.Molecule.setGUIContracted(boolean) |
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Sgroup.setXState(int state, int opts) |
Marvin 6.2 |
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chemaxon.struc.sgroup |
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Expandable.COORDS_UPDATE |
Marvin 6.2 |
Not supported feature. |
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Expandable.REVERSIBLE_EXPAND |
Marvin 6.2 |
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SuperatomSgroup.cloneLeavingGroups(SuperatomSgroup sasg) |
Marvin 6.2 |
Not supported feature. |
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SuperatomSgroup.expandOther(int opts, Molecule moltoexpand) |
Marvin 6.2 |
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SuperatomSgroup.getParentSgroupGraph() |
Marvin 6.2 |
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SuperatomSgroup.removeLeavingGroup(int order) |
Marvin 6.2 |
Not supported feature. |
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SuperatomSgroup.setCrossingBondType(int order, BondType newType) |
Marvin 6.2 |
Not supported feature. |
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SuperatomSgroup.setLeavingGroup(int order, int atNo, String alternativeName, BondType crossingBondType) |
Marvin 6.2 |
Not supported feature. |
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SuperatomSgroup.setLeavingGroup(int order, int atNo, String alternativeName) |
Marvin 6.2 |
Not supported feature. |
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SuperatomSgroup.setLeavingGroup(int order, int atNo) |
Marvin 6.2 |
Not supported feature. |
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SuperatomSgroup.setLeavingGroupAlternativeName(int order, String alternativeName) |
Marvin 6.2 |
Not supported feature. |
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SuperatomSgroup.updateAttachmentPoints() |
Marvin 6.2 |
chemaxon.struc.sgroup.SuperatomSgroup.calculateAttachmentPoints() |
chemaxon.util.iterator |
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IteratorFactory.INCLUDE_CHEMICAL_ATOMS |
Marvin 6.2 |
chemaxon.util.iterator.IteratorFactory.INCLUDE_CHEMICAL_ATOMS_ONLY |