--peptide <string>

The string is a valid one or three letter sequence.

Example:

• convert a one-letter sequence to a molfile:

  molconvert --peptide FFKMLL mol -o peptide.mol

peptide:3

Using this option the output will be a three-letter sequence.

Examples:

• convert SMILES representation to a three-letter sequence

  molconvert peptide:3 -s "[H]NCC(=O)NC(C)C(=O)NCC(O)=O"

• convert one-letter sequence to a three-letter sequence

  molconvert --peptide GAG peptide:3

peptide:1

One-letter peptide sequence option.

Example:

• convert the SMILES string to a one-letter sequence

  molconvert peptide:1 -s "[H]NCC(=O)NC(C)C(=O)NCC(O)=O"