Registering a new structure

Registering single compounds

Registering compounds with salts

Preliminary step: Hydrochloric acid (HCl) is present in the Salt Dictionary with Id=1.

  1. Draw pyridine structure and click on Apply

    images/download/attachments/43906937/str_salt.png

2. Click on the "Add new"

images/download/attachments/43906937/str_salt_2.png

3. In the Search for salts/solvates field start typing the salt name

images/download/attachments/43906937/str_salt_3.png

4. Select Hydrochloride from the salt list.

images/download/attachments/43906937/str_salt_4.png

5. Type 1 for the salt multiplicity, then click on the Add button.

images/download/attachments/43906937/str_salt_5.png

6. As a result the salt will appear on the structure fused image

images/download/attachments/43906937/str_salt_6.png

In order to register the structure fill with data the mandatory fields (marked with yellow background), e.g. LnbRef, then click on the blue Register button on the top right side of the page.

images/download/attachments/43906937/str_salt_7.png

Registering compounds with isotopes

Compounds with isotopes (by default) are registered as new versions of parent compounds that are neutralized and without isotopes.

Preliminary steps:

  • Hydrochloric acid (HCl) is present in the Salt Dictionary with Id=1.

  • Pyridine structure with 1xHCl is already registered

Steps for registering a structure with isotope:

  1. Drawn your structure using the (Marvin JS) structure editor.
    Right click on the atom where you want to set the isotope.

    images/download/attachments/43906937/str-iso.png

2. In the Atom properties window click on the padlock sign at the Isotope, then set the desired value. Click OK.

images/download/attachments/43906937/str-iso2.png

3. Set anLnbRef, then click on the blue Register button on the top right side of the page.

images/download/attachments/43906937/str-iso3.png

4. In the Registration summary window a new version Id will be given under an existing parent, since the isotopic structure will be registered as a new version under an existing parent.

images/download/attachments/43906937/str-iso4.png

5. Click on the View Details option. The registered strcuture will be displayed on the Browse page within the tree representation.

images/download/attachments/43906937/str-iso5_2.png

images/download/attachments/43906937/str-iso5_1.png

Version representation

Parent representation

Registering multi-component compounds