PDB import and export options

Import Options

Codename

Explanation

H or +H

Add explicit hydrogen atoms. Usage: "PDB:H"

-H

Remove explicit hydrogen atoms. Usage: "PDB:-H"

c

Omit CONECT records for hetero compounds. Bonds are detected by the PDB reader modul based on local geometry unless the b option is specified. Usage: "pdb:c"

b

Do not recognize bond order. All bonds either defined by CONECT records or generated by PDB import are represented as ANY bonds. Usage: "pdb:b"

Export Options

Codename

Explanation

H or +H

Add explicit hydrogen atoms. Usage: "PDB:H"

-H

Remove explicit Hydrogen atoms. Usage: "PDB:-H"