Bonds
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Down Wedge Orientation allows changing the wedge bond display convention. Down wedge points downward in MDL's convention, upward (at the chiral center) in Daylight's.
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Any Bond Line Style offers three different modes to display bonds of unkown types: Automatic, Dashed and Solid. This option can be set separately to be used in MarvinSketch and MarvinView, respectively.
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Terminal Bond Deletion Method offers two ways to delete the terminal bond of a molecule: only the bond is deleted or the terminal atom disappears along the bond.
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"Coordinate" Bond Line Style allows changing the type of coordinate bonds from the default ones (arrow for single atom and hashed for multicenter) to solid.